Pipits

Description

pipits website  

PIPITS is an automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform.

Required Modules

Serial

• gcc/5.2.0
• pipits

System Variables

• HPC_{{#uppercase:pipits}}_DIR - installation directory

Citation

If you publish research that uses pipits you have to cite it as follows:

Hyun S. Gweon, Anna Oliver, Joanne Taylor, Tim Booth, Melanie Gibbs, Daniel S. Read, Robert I. Griffiths and Karsten Schonrogge, PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform, Methods in Ecology and Evolution, DOI: 10.1111/2041-210X.12399