PIPITS is an automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform.
module spider pipits to find out what environment modules are available for this application.
- HPC_PIPITS_DIR - installation directory
If you publish research that uses pipits you have to cite it as follows:
Hyun S. Gweon, Anna Oliver, Joanne Taylor, Tim Booth, Melanie Gibbs, Daniel S. Read, Robert I. Griffiths and Karsten Schonrogge, PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform, Methods in Ecology and Evolution, DOI: 10.1111/2041-210X.12399