Pipits

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Description

pipits website  

PIPITS is an automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform.

Required Modules

Serial

  • gcc/5.2.0
  • pipits

System Variables

  • HPC_PIPITS_DIR - installation directory




Citation

If you publish research that uses pipits you have to cite it as follows:

Hyun S. Gweon, Anna Oliver, Joanne Taylor, Tim Booth, Melanie Gibbs, Daniel S. Read, Robert I. Griffiths and Karsten Schonrogge, PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform, Methods in Ecology and Evolution, DOI: 10.1111/2041-210X.12399