Difference between revisions of "NPhase"
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Johnbullard (talk | contribs) (Created page with "Category:Software Category:Bioinformatics Category:Pipeline Category:Phasing Category:Polyploid {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nphase}}...") |
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Revision as of 19:32, 3 June 2022
Description
nPhase is a ploidy agnostic tool developed in python which predicts the haplotypes of a sample that was sequenced by both long and short reads by aligning them to a reference. It should work with any ploidy
Environment Modules
Run module spider nphase to find out what environment modules are available for this application.
System Variables
- HPC_NPHASE_DIR - installation directory
- HPC_NPHASE_BIN - executable directory