Difference between revisions of "MountainSort"
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(Created page with "Category:SoftwareCategory:Library {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mountainsort}} |{{#vardefine:url|https://github.com/magland/mountainlab}} <!--CONF...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 21:22, 6 December 2019
Description
MountainSort (a component of MountainLab) is spike sorting software developed by Jeremy Magland, Alex Barnett, and Leslie Greengard at the Center for Computational Biology, Flatiron Institute in close collaboration with Jason Chung and Loren Frank at UCSF department of Physiology. It is part of MountainLab, a general framework for data analysis and visualization.
Environment Modules
Run module spider mountainsort to find out what environment modules are available for this application.
System Variables
- HPC_MOUNTAINSORT_DIR - installation directory
Citation
If you publish research that uses mountainsort you have to cite it as follows: