Jump to navigation Jump to search


mountainsort website  

MountainSort (a component of MountainLab) is spike sorting software developed by Jeremy Magland, Alex Barnett, and Leslie Greengard at the Center for Computational Biology, Flatiron Institute in close collaboration with Jason Chung and Loren Frank at UCSF department of Physiology. It is part of MountainLab, a general framework for data analysis and visualization.

Environment Modules

Run module spider mountainsort to find out what environment modules are available for this application.

System Variables

  • HPC_MOUNTAINSORT_DIR - installation directory


If you publish research that uses mountainsort you have to cite it as follows:

Barnett, Alex H., Jeremy F. Magland, and Leslie F. Greengard. "Validation of Neural Spike Sorting Algorithms without Ground-truth Information." Journal of Neuroscience Methods 264 (2016): 65-77