Difference between revisions of "FastGEAR"

From UFRC
Jump to navigation Jump to search
Line 1: Line 1:
[[Category:Software]][[Category:Phylogenetics]]
+
[[Category:Software]][[Category:Biology]][[Category:Genomics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|fastgear}}
 
|{{#vardefine:app|fastgear}}

Revision as of 15:23, 15 August 2022

Description

fastgear website  

FastGEAR is a software for analyzing sequence alignments.

Environment Modules

Run module spider fastgear to find out what environment modules are available for this application.

System Variables

  • HPC_FASTGEAR_DIR - installation directory
  • HPC_FASTGEAR_BIN - executable directory




Citation

If you publish research that uses fastgear you have to cite it as follows:

Mostowy, R., Croucher, N.J., Andam, C.P., Corander, J., Hanage, W.P. and Marttinen, P. (2017). Efficient inference of recent and ancestral recombination within bacterial populations. Molecular Biology and Evolution, 34(5), 1167-1182.