Difference between revisions of "NxTrim"
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
Revision as of 20:10, 10 June 2022
Description
Software to remove Nextera Mate Pair adapters and categorise reads according to the orientation implied by the adapter location. This software is not commercially supported.
Environment Modules
Run module spider nxtrim to find out what environment modules are available for this application.
System Variables
- HPC_NXTRIM_DIR - installation directory
Citation
If you publish research that uses nxtrim you have to cite it as follows: