Difference between revisions of "SHAPEIT"
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Revision as of 21:23, 5 April 2018
Description
SHAPEIT is a fast and accurate method for estimation of haplotypes (aka phasing) from genotype or sequencing data.
Required Modules
Serial
- shapeit
System Variables
- HPC_{{#uppercase:shapeit}}_DIR - installation directory
Citation
If you publish research that uses shapeit you have to cite it as follows:
https://mathgen.stats.ox.ac.uk/genetics_software/shapeit/shapeit.html#citations
Validation
- Validate 4/5/2018