Metaxa2: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
Moskalenko (talk | contribs) No edit summary |
||
| Line 1: | Line 1: | ||
[[Category:Software]][[Category:Biology]][[Category:NGS]] | [[Category:Software]][[Category:Biology]][[Category:NGS]] | ||
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app| | |{{#vardefine:app|metaxa2}} | ||
|{{#vardefine:url|http://microbiology.se/software/metaxa2/}} | |{{#vardefine:url|http://microbiology.se/software/metaxa2/}} | ||
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
Revision as of 16:15, 16 July 2015
Description
Metaxa2 is a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets.
Required Modules
Serial
- metaxa2
System Variables
- HPC_{{#uppercase:metaxa2}}_DIR - installation directory
Citation
If you publish research that uses metaxa2 you have to cite it as follows: