Difference between revisions of "Circlator"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|circlator}} | |{{#vardefine:app|circlator}} | ||
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<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
Latest revision as of 13:34, 15 August 2022
Description
A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript.
Environment Modules
Run module spider circlator to find out what environment modules are available for this application.
System Variables
- HPC_CIRCLATOR_DIR - installation directory
Citation
If you publish research that uses circlator you have to cite it as follows: