Difference between revisions of "CMS"
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(Created page with "Category:SoftwareCategory:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|cms}} |{{#vardefine:url|https://github.com/beatrixparis/connectivity-modeling-syst...") |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 21:02, 6 December 2019
Description
The CMS is a multiscale stochastic Lagrangian framework developed by Paris' Lab at the Rosenstiel School of Marine & Atmospheric Science to study complex migrations and give probability estimates of dispersion, connectivity, fate of pollutants, and other Lagrangian phenomena. This repository facilitates community contributions to CMS modules.
Required Module
Parallel (MPI)
- gcc/5.2.0
- openmpi/1.10.2
- cms
System Variables
- HPC_CMS_DIR - installation directory
- HPC_CMS_BIN - executable directory
- HPC_CMS_DOC - documentation directory
Citation
If you publish research that uses cms you have to cite it as follows: