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The CMS is a multiscale stochastic Lagrangian framework developed by Paris' Lab at the Rosenstiel School of Marine & Atmospheric Science to study complex migrations and give probability estimates of dispersion, connectivity, fate of pollutants, and other Lagrangian phenomena. This repository facilitates community contributions to CMS modules.

Required Module

Parallel (MPI)

  • gcc/5.2.0
  • openmpi/1.10.2
  • cms

System Variables

  • HPC_CMS_DIR - installation directory
  • HPC_CMS_BIN - executable directory
  • HPC_CMS_DOC - documentation directory


If you publish research that uses cms you have to cite it as follows:

Connectivity Mocdeling System (CMS) is developed by Claire B. Paris, at the Rosenstiel School of Marine and Atmospheric Science (RSMAS). All code is released under the GNU General Public License v3.0.