Difference between revisions of "CPAT"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|cpat}} |{{#vardefine:url|http://rna-cpat.sourceforge.net...") |
|||
(One intermediate revision by one other user not shown) | |||
Line 21: | Line 21: | ||
<!--Modules--> | <!--Modules--> | ||
− | == | + | ==Environment Modules== |
− | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
− | |||
− | |||
− | |||
− | < | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
==System Variables== | ==System Variables== | ||
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== |
Latest revision as of 16:34, 10 June 2022
Description
CPAT - RNA coding potential assessment tool
Environment Modules
Run module spider cpat
to find out what environment modules are available for this application.
System Variables
- HPC_CPAT_DIR - installation directory
- HPC_CPAT_BIN - executable directory
Citation
If you publish research that uses cpat you have to cite it as follows: