CPAT

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Description

cpat website  

CPAT - RNA coding potential assessment tool

Required Modules

Serial

  • gcc/5.2.0
  • cpat

System Variables

  • HPC_CPAT_DIR - installation directory
  • HPC_CPAT_BIN - executable directory




Citation

If you publish research that uses cpat you have to cite it as follows:

Wang, L., Park, H. J., Dasari, S., Wang, S., Kocher, J.-P., & Li, W. (2013). CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model. Nucleic Acids Research, 41(6), e74.