Difference between revisions of "DeconSeq"
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Latest revision as of 17:00, 10 June 2022
Description
The DeconSeq tool can be used to automatically detect and efficiently remove sequence contaminations from genomic and metagenomic datasets. It is easily configurable and provides a user-friendly interface.
Environment Modules
Run module spider deconseq to find out what environment modules are available for this application.
System Variables
- HPC_DECONSEQ_DIR - installation directory
Additional Information
This module also includes PrinSeq.
Citation
If you publish research that uses deconseq you have to cite it as follows: