Difference between revisions of "OrthoFinder"
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:NGS]] |
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==System Variables== | ==System Variables== | ||
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Latest revision as of 17:58, 19 August 2022
Description
OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.
Environment Modules
Run module spider orthofinder to find out what environment modules are available for this application.
System Variables
- HPC_ORTHOFINDER_DIR - installation directory