Difference between revisions of "BEDOPS"
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Latest revision as of 12:48, 15 August 2022
Description
BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale. Tasks can be easily split by chromosome for distributing whole-genome analyses across a computational cluster.
You can read more about BEDOPS and how it can be useful for your research in the Overview documentation, as well as in the original manuscript.
Environment Modules
Run module spider bedops to find out what environment modules are available for this application.
System Variables
- HPC_BEDOPS_DIR - installation directory