TAPIS

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Description

tapis website  

TAPIS (Transriptome Analysis Pipeline from Isoform Sequencing) is a program for correcting and aligning long reads with/without second generation reads, transcript clustering, novel and full-length splice isoform detection, and identification and analysis of polyadenylation (poly(A)) and alternative poly(A) (APA).

Required Modules

Serial

  • gcc/5.2.0
  • tapis

System Variables

  • HPC_TAPIS_DIR - installation directory