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simseq website  

An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina data as possible. Some of these quirks include the potential for chimeric reads, and non-biotinylated fragment pull down in mate-pair libraries.

Environment Modules

Run module spider simseq to find out what environment modules are available for this application.

System Variables

  • HPC_SIMSEQ_DIR - installation directory
  • HPC_SIMSEQ_BIN - executable directory