SNPsplit is an allele-specific alignment sorter which is designed to read alignment files in SAM/ BAM format and determine the allelic origin of reads that cover known SNP positions.
module spider SNPsplit to find out what environment modules are available for this application.
- HPC_SNPSPLIT_DIR - installation directory
- HPC_SNPSPLIT_BIN - executable directory
If you publish research that uses SNPsplit you have to cite it as follows: