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pod5 website  

POD5 is a file format for storing nanopore dna data in an easily accessible way. The format is able to be written in a streaming manner which allows a sequencing instrument to directly write the format.

Data in POD5 is stored using Apache Arrow, allowing users to consume data in many languages using standard tools.

Environment Modules

Run module spider pod5 to find out what environment modules are available for this application.

System Variables

  • HPC_POD5_DIR - installation directory
  • HPC_POD5_BIN - executable directory