Platanus
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Description
Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data.
Environment Modules
Run module spider platanus
to find out what environment modules are available for this application.
System Variables
- HPC_PLATANUS_DIR - installation directory
- HPC_PLATANUS_BIN - exectuable directory
Additional Information
This module includes the following platanus executables:
- Platanus Assembler
- Platanus-alle (Platanus2)
- Pltanus_trim
- MetaPlatanus
- BactSNP
Citation
If you publish research that uses platanus you have to cite it as follows: