MHCflurry implements class I peptide/MHC binding affinity prediction. By default it supports 112 MHC alleles using ensembles of allele-specific models. Pan-allele predictors supporting virtually any MHC allele of known sequence are available for testing (see below). MHCflurry runs on Python 2.7 and 3.4+ using the keras neural network library. It exposes command-line and Python library interfaces.
module spider mhcflurry to find out what environment modules are available for this application.
- HPC_MHCFLURRY_DIR - installation directory
- HPC_MHCFLURRY_BIN - executable directory
If you publish research that uses mhcflurry you have to cite it as follows: