LINKS

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Description

links website  

LINKS is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Technologies Ltd. It can be used to scaffold high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft genomes, etc)

Required Modules

Serial

  • links

System Variables

  • HPC_LINKS_DIR - installation directory