HmmCleaner
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Description
HmmCleaner is a tool to remove alignment and sequencing error containing segments from multiple sequence alignments (MSA) using profile hidden Markov models (pHMM). This tool is based on Bio::MUST modules and integrates into MUST environment.
Environment Modules
Run module spider hmmcleaner to find out what environment modules are available for this application.
System Variables
- HPC_HMMCLEANER_DIR - installation directory
- HPC_HMMCLEANER_BIN - executable directory