GroopM
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Description
GroopM is a metagenomic binning toolset. It leverages spatio-temoral dynamics (differential coverage) to accurately (and almost automatically) extract population genomes from multi-sample metagenomic datasets.
Environment Modules
Run module spider groopm to find out what environment modules are available for this application.
System Variables
- HPC_GROOPM_DIR - installation directory
- HPC_GROOPM_BIN - executable directory
Citation
If you publish research that uses groopm you have to cite it as follows:
https://peerj.com/articles/603/