This document is intended to give a technical description of the FEELnc pipeline in order to annotate long non-coding RNAs (lncRNAs) based on reconstructed transcripts from RNA-seq data (either with or without a reference genome). For a more general overview of lncRNAs annotation using RNASeq and FEELnc specific advantages, you could point to the FEELnc paper.
module spider feelnc to find out what environment modules are available for this application.
- HPC_FEELNC_DIR - installation directory
- HPC_FEELNC_BIN - executable directory
If you publish research that uses feelnc you have to cite it as follows: