DVGfinder is a tool that integrates the most used DVGs search algorithms, ViReMa-a and DI-tector, in a unique workflow, making the analysis of a sample easier and more intuitive. Also, DVGfinder_v3 implements a Gradient Boosting classifier to try to reduce the number of false positives introduced by the search algorithms and generates an HTML report with interactive tables and plots that facilitates a first exploration of the results.
module spider dvgfinder to find out what environment modules are available for this application.
- HPC_DVGFINDER_DIR - installation directory
- HPC_DVGFINDER_BIN - executable directory
To run DVGfinder:
$ git clone https://github.com/MJmaolu/DVGfinder.git $ cd DVGfinder $ chmod -R +x . $ module load dvgfinder
Follow the DVGfinder README 'Usage' instructions