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coot website  

Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data.

Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization, non-crystallographic symmetry and more.

Environment Modules

Run module spider coot to find out what environment modules are available for this application.

System Variables

  • HPC_COOT_DIR - installation directory
  • HPC_COOT_BIN - executable directory


If you publish research that uses coot you have to cite it as follows: