AmPEPpy

Description

ampeppy website  

amPEPpy is a Python 3 application that implements a random forest classifier for predicting antimicrobial peptide sequences using the Distribution descriptor set from the Global Protein Sequence Descriptors. amPEPpy has improved portability, increased accuracy relative to similar methods, and includes utilities for easily training and optimizing random forest classifiers on novel training data.

Environment Modules

Run module spider ampeppy to find out what environment modules are available for this application.

System Variables

• HPC_AMPEPPY_DIR - installation directory
• HPC_AMPEPPY_BIN - executable directory

Citation

If you publish research that uses ampeppy you have to cite it as follows:

https://github.com/tlawrence3/amPEPpy#citing