amPEPpy is a Python 3 application that implements a random forest classifier for predicting antimicrobial peptide sequences using the Distribution descriptor set from the Global Protein Sequence Descriptors. amPEPpy has improved portability, increased accuracy relative to similar methods, and includes utilities for easily training and optimizing random forest classifiers on novel training data.
module spider ampeppy to find out what environment modules are available for this application.
- HPC_AMPEPPY_DIR - installation directory
- HPC_AMPEPPY_BIN - executable directory
If you publish research that uses ampeppy you have to cite it as follows: