Difference between revisions of "WU BLAST"

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<!--Modules-->
 
<!--Modules-->
==Required Modules==
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==Environment Modules==
[[Modules|modules documentation]]
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
*{{#var:app}}
 
<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below-->
 
 
==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
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See the [[{{PAGENAME}}_Install]] page for {{#var: app}} installation notes.|}}
 
See the [[{{PAGENAME}}_Install]] page for {{#var: app}} installation notes.|}}
 
__NOTOC____NOEDITSECTION__
 
__NOTOC____NOEDITSECTION__
=Validation=
 
* Validated 4/5/2018
 

Revision as of 18:33, 10 June 2022

Description

wublast website  

WU-Blast is the former Washington University BLAST now provided by the Advanced Biocomputing, LLC.

  • most sensitive, fastest and flexible core BLAST engine — target your searches easier and get better results faster
  • faster, easier and more robust database management — faster updates leave more time to analyze; robust error checking identifies problems sooner; flexible identifiers improve pipeline design and management
  • long-term consistent behavior—drop-in upgrades for over 15 years—avoids wholesale retraining of staff and retuning of analysis pipelines, reduces errors and saves time
  • up to twice as fast as NCBI BLAST, yet more sensitive and robust
  • no special/expensive hardware requirements or usage restrictions

Environment Modules

Run module spider wublast to find out what environment modules are available for this application.

System Variables

  • HPC_WUBLAST_DIR - installation directory