Difference between revisions of "VarSimLab"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BiologyCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|varsimlab}} |{{#vardefine:url|https://github.com/NabaviLab/Va...") |
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Revision as of 22:04, 20 February 2018
Description
VarSimLab is a web-based package for studying genomic variations in a given genome. As of the current version (nabavilab/varsimlab:0.2), the simulator generates artificial short reads, which harbor structural and copy number variations. In addition, it simulates tumor heterozygosity (Ploidy and Subclones).
Environment Modules
Run module spider varsimlab to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:varsimlab}}_DIR - installation directory