Difference between revisions of "VDJtools"

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Revision as of 20:43, 26 January 2018

Description

vdjtools website  

A comprehensive analysis framework for T-cell and B-cell repertoire sequencing data.

Environment Modules

Run module spider vdjtools to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:vdjtools}}_DIR - installation directory
  • HPC_{{#uppercase:vdjtools}}_BIN - executable directory
  • HPC_{{#uppercase:vdjtools}}_DOC - documentation directory




Citation

If you publish research that uses vdjtools you have to cite it as follows:

Shugay M et al. VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires. PLoS Comp Biol 2015; 11(11):e1004503-e1004503.


Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=VDJtools&oldid=16784"