Difference between revisions of "TrimAl"
Jump to navigation
Jump to search
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Alignment]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|trimal}} | |{{#vardefine:app|trimal}} | ||
| Line 21: | Line 21: | ||
<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
| − | |||
| − | |||
| − | < | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
Latest revision as of 19:32, 24 August 2022
Description
trimAl is a tool for the automated removal of spurious sequences or poorly aligned regions from a multiple sequence alignment.
Environment Modules
Run module spider trimal to find out what environment modules are available for this application.
System Variables
- HPC_TRIMAL_DIR - installation directory
Citation
If you publish research that uses trimal you have to cite it as follows: