ToFU2

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Description

tofu2 website  

         This is the developmenal (ToFU2) branch of the PacBio IsoSeq analysis
         software. The isoform sequencing (Iso-Seq) application generates full-length
         cDNA sequences — from the 5’ end of transcripts to the poly-A tail —
         eliminating the need for transcriptome reconstruction using
         isoform-inference algorithms. The Iso-Seq method generates accurate
         information about alternatively spliced exons and transcriptional start
         sites. It also delivers information about poly-adenylation sites for
         transcripts up to 10 kb in length across the full complement of isoforms
         within targeted genes or the entire transcriptome.

Required Modules

System Variables

  • HPC_{{#uppercase:tofu2}}_DIR - installation directory