Difference between revisions of "Tcoffee"
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Latest revision as of 20:46, 12 August 2022
Description
T-Coffee is a multiple sequence alignment package. You can use T-Coffee to align sequences or to combine the output of your favorite alignment methods (Clustal, Mafft, Probcons, Muscle...) into one unique alignment (M-Coffee).
Environment Modules
Run module spider tcoffee to find out what environment modules are available for this application.
System Variables
- HPC_TCOFFEE_DIR - installation directory
- HPC_TCOFFEE_BIN - executable directory
Citation
If you publish research that uses tcoffee you have to cite it as follows:
T-Coffee: A novel method for multiple sequence alignments. Notredame,Higgins,Heringa,JMB,302(205-217), 2000