Difference between revisions of "TESS"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|tess}} |{{#vardefine:url|http://membres-timc.imag.fr/O...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
||
(One intermediate revision by one other user not shown) | |||
Line 33: | Line 33: | ||
--> | --> | ||
==System Variables== | ==System Variables== | ||
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Line 67: | Line 67: | ||
<!--Turn the Table of Contents and Edit paragraph links ON/OFF--> | <!--Turn the Table of Contents and Edit paragraph links ON/OFF--> | ||
__NOTOC____NOEDITSECTION__ | __NOTOC____NOEDITSECTION__ | ||
+ | =Validation= | ||
+ | * Validated 4/5/2018 |
Revision as of 21:29, 6 December 2019
Description
TESS implements a Bayesian clustering algorithm for spatial population genetic analyses. It can perform both individual geographical assignment and admixture analysis. It is designed for seeking genetic discontinuities in continuous populations and estimating spatially varying individual admixture proportions. TESS returns graphical displays of geographical cluster assignments or admixture proportions (depending on the model used) and textual output of the admixture Q matrix.
Required Modules
Serial
- tess
System Variables
- HPC_TESS_DIR
Validation
- Validated 4/5/2018