Starseqr

From UFRC
Revision as of 14:28, 2 October 2018 by Maxprok (talk | contribs) (Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|starseqr}} |{{#vardefine:url|https://github.com/ExpressionAnalysis/STAR-SEQR...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

starseqr website  

RNA Fusion Detection and Quantification using STAR.

Post-alignment run times are typically <20 minutes using 4 threads. Development is still ongoing and several features are currently in the works. DNA breakpoint detection is still experimental.

Environment Modules

Run module spider starseqr to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:starseqr}}_DIR - installation directory
  • HPC_{{#uppercase:starseqr}}_BIN - executable directory