Difference between revisions of "Sourmash"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Revision as of 21:24, 6 December 2019
Description
Compute and compare MinHash signatures for DNA data sets.
Environment Modules
Run module spider sourmash to find out what environment modules are available for this application.
System Variables
- HPC_SOURMASH_DIR - installation directory
- HPC_SOURMASH_BIN - executable directory
Citation
If you publish research that uses sourmash you have to cite it as follows:
Sourmash 1.0 is published on JOSS; please cite that paper if you use (doi: 10.21105/joss.00027):.