Difference between revisions of "SomaticSeq"

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Latest revision as of 00:06, 22 August 2022

Description

somaticseq website  

SomaticSeq is an ensemble caller that has the ability to use machine learning to filter out false positives. The detailed documentation is included in the repo, located in docs/Manual.pdf.

Environment Modules

Run module spider somaticseq to find out what environment modules are available for this application.

System Variables

  • HPC_SOMATICSEQ_DIR - installation directory
  • HPC_SOMATICSEQ_BIN - executable directory