Difference between revisions of "Seqtk"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:BioinformaticsCategory:GenomicsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Seqtk}} |{{#vardefine:url|https://gith...") |
(No difference)
|
Revision as of 14:27, 6 August 2014
Description
Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip.
Required Modules
Serial
- Seqtk
Parallel (OpenMP)
- intel
- Seqtk
Parallel (MPI)
- intel
- openmpi
- Seqtk
System Variables
- HPC_{{#uppercase:Seqtk}}_DIR