Difference between revisions of "Samtools"
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Revision as of 17:53, 10 August 2012
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Description
SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.
Note: The Samtools 0.1.18 install includes the tabix and bgzip binaries from the Tabix-0.2.6 software.
Required Modules
Serial
- samtools
- HPC_SAMTOOLS_BIN - executable directory