Difference between revisions of "RnaQUAST"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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Revision as of 21:24, 6 December 2019

Description

rnaquast website  

rnaQUAST is a tool for evaluating quality of transcriptome assemblies using reference genome and gene database.


Required Modules

Serial

  • rnaquast

System Variables

  • HPC_RNAQUAST_DIR - installation directory




Citation

If you publish research that uses rnaquast you have to cite it as follows:

http://spades.bioinf.spbau.ru/rnaquast/release1.2.0/manual.html#sec5