Difference between revisions of "Razers3"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_EXE - example directory |
<!--Configuration--> | <!--Configuration--> | ||
Revision as of 21:24, 6 December 2019
Description
RazerS 3 is a tool for mapping millions of short genomic reads onto a reference genome. It was designed with focus on mapping next-generation sequencing reads onto whole DNA genomes. RazerS 3 searches for matches of reads with a percent identity above a given threshold (-i X), whereby it detects alignments with mismatches as well as gaps.
Required Modules
Serial
- razers3
System Variables
- HPC_RAZERS3_DIR - installation directory
- HPC_RAZERS3_BIN - executable directory
- HPC_RAZERS3_DOC - documentation directory
- HPC_RAZERS3_EXE - example directory