RStudio

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Revision as of 17:59, 31 March 2023 by Moskalenko (talk | contribs)
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Description

rstudio website  

RStudio is an integrated development environment (IDE) for R. It includes a console, syntax-highlighting editor that supports direct code execution, as well as tools for plotting, history, debugging and workspace management.

Environment Modules

Run module spider R to find out what R environment modules that contain this application are available.

System Variables

  • HPC_RSTUDIO_DIR - installation directory

Additional Information

RStudio is an integrated development environment (IDE) for R. It includes a console, syntax-highlighting editor that supports direct code execution, as well as tools for plotting, history, debugging and workspace management.

The recommended way to run RStudio on HiPerGator is to start it in Open OnDemand.

When RStudio starts the file browser will be limited to your home directory. To navigate to /blue or /orange either create a symlink to your target directory in home

E.g.

$ cd
$ ln -s /blue/MYGROUP/$USER/ blue

where MYGROUP is your real group name

After you create a symlink you'll be able to go into the 'blue' directory in the RStudio file browser under home.

or change your working directory using R controls:

  • Click on the '[Gear] More' menu in the RStudio file browser and choose 'Synchronize Working Directory'
  • Run
setwd('/blue/MYGROUP/MYUSER/')

in the RStudo REPL and the file browser should immediately reflect the new working directory.