RFAA

From UFRC
Revision as of 16:56, 27 March 2024 by Cabreraruizdiazj (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

rfaa website  

RoseTTAFold All-Atom is a biomolecular structure prediction neural network that can predict a broad range of biomolecular assemblies including proteins, nucleic acids, small molecules, covalent modifications and metals as outlined in the RFAA paper.

Environment Modules

Run module spider rfaa to find out what environment modules are available for this application.

System Variables

  • HPC_RFAA_DIR - installation directory
  • HPC_RFAA_BIN - executable directory
  • UNIREF30_DB - database location
  • BFD_DB - database location
  • HPC_RFAA_PDB - structure templates directory

Additional Information

This environment module provides the environment variables to databases and structure templates as well as required dependencies to run the software. However, users should download the contents of the repo locally to run the scripts from https://github.com/baker-laboratory/RoseTTAFold-All-Atom