Pysamstats

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Description

pysamstat website  

A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.

Environment Modules

Run module spider pysamstat to find out what environment modules are available for this application.

System Variables

  • HPC_PYSAMSTAT_DIR - installation directory
  • HPC_PYSAMSTAT_BIN - executable directory






Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Pysamstats&oldid=20618"