Pplacer

Description

pplacer website  

pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis.

Environment Modules

Run module spider pplacer to find out what environment modules are available for this application.

System Variables

• HPC_PPLACER_DIR - installation directory
• HPC_PPLACER_BIN - installation directory