Difference between revisions of "PeakSplitter"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m (Text replace - "|{{#vardefine:intel|}} <!-- E.g. "11.1" --> |{{#vardefine:mpi|}} <!-- E.g. "openmpi/1.3.4" -->" to "") |
|||
| (8 intermediate revisions by 3 users not shown) | |||
| Line 1: | Line 1: | ||
__NOTOC__ | __NOTOC__ | ||
__NOEDITSECTION__ | __NOEDITSECTION__ | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:ChIP-Seq]] |
| − | + | {|<!--Main settings - REQUIRED--> | |
| − | {| | ||
| − | <!--Main settings - REQUIRED--> | ||
|{{#vardefine:app|peaksplitter}} | |{{#vardefine:app|peaksplitter}} | ||
|{{#vardefine:url|http://www.ebi.ac.uk/bertone/software.html}} | |{{#vardefine:url|http://www.ebi.ac.uk/bertone/software.html}} | ||
| − | |||
| − | |||
| − | |||
|{{#vardefine:exe|}} <!--Present manual instructions for running the software --> | |{{#vardefine:exe|}} <!--Present manual instructions for running the software --> | ||
|{{#vardefine:conf|}} <!--Enable config wiki page link - {{#vardefine:conf|1}} = ON/conf|}} = OFF--> | |{{#vardefine:conf|}} <!--Enable config wiki page link - {{#vardefine:conf|1}} = ON/conf|}} = OFF--> | ||
| Line 24: | Line 19: | ||
Subdivision of ChIP-seq/ChIP-chip regions into discrete signal peaks. | Subdivision of ChIP-seq/ChIP-chip regions into discrete signal peaks. | ||
| − | + | <!--Modules--> | |
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
| − | + | ==System Variables== | |
| − | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | |
| − | == | ||
| − | *{{#var:app}} | ||
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
|}} | |}} | ||
Latest revision as of 20:19, 12 August 2022
Description
Subdivision of ChIP-seq/ChIP-chip regions into discrete signal peaks.
Environment Modules
Run module spider peaksplitter to find out what environment modules are available for this application.
System Variables
- HPC_PEAKSPLITTER_DIR - installation directory