Difference between revisions of "PHASE"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|phase}} |{{#vardefine:url|http://stephenslab.uchicago.ed...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_DOC - documentation directory
+
* HPC_{{uc:{{#var:app}}}}_DOC - documentation directory
* HPC_{{#uppercase:{{#var:app}}}}_EXE - example directory
+
* HPC_{{uc:{{#var:app}}}}_EXE - example directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Revision as of 21:22, 6 December 2019

Description

phase website  

PHASE: A program for reconstructing haplotypes from population data

Environment Modules

Run module spider phase to find out what environment modules are available for this application.

System Variables

  • HPC_PHASE_DIR - installation directory
  • HPC_PHASE_BIN - executable directory
  • HPC_PHASE_DOC - documentation directory
  • HPC_PHASE_EXE - example directory




Citation

If you publish research that uses phase you have to cite it as follows:

In all cases, please specify the version of the software used, and any deviations from the default options.